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So my solution to this is very comparable u/fpepin proposition. I hope It truly is extra arms on this means you like a newbie can wrap your head close to it.
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So the initial idea to unravel this is probably to make use of your create_a_pathway perform and create an array that appears like this: [substrate, enzyme, products] (eg. [A, enzymeA2B, B])and thrust it into a world array which functions like a container. If you would like attain your full pathway(illustration pathway A -> C) you would want to discover the array in the container that commences by using a and you should then see the item is B so now you would need to find the array that commences with B and afterwards take a look just what the product is.
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As you can see this results in being rather messy and also the capabilities we would need to publish to iterate by these pathways will be like it quite challenging too.
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